Helomnix

Digital Twins forHematologic Oncology

Reproducible Functional State Modeling for Translational Decision-Making

Helomnix builds reusable, biology-grounded Digital Twin reference maps that structure multi-omics heterogeneity into interpretable functional disease states — supporting translational stratification, target prioritization, and structured reporting.

Built on curated multi-omics cohorts and proprietary in-vitro state models in collaboration with academic and clinical partners.

Structuring Disease Heterogeneity

Hematological cancers exhibit profound molecular and cellular heterogeneity that is only partially captured by mutation-based or outcome-driven models. Helomnix addresses this challenge by building reusable, state-based digital twins from multi-omics cohorts, providing a structured framework to analyze disease biology and support precision medicine programs.

Why Not Standard Risk Models?

Traditional Approaches Rely On

  • Mutation-based genomic classification
  • Outcome-trained risk scores
  • Trial-specific feature models

These Methods

  • Collapse multi-layer biology into single variables
  • Cannot explain divergent disease trajectories within the same genomic class
  • Cannot be reused across cohorts without retraining
  • Do not encode mechanistic state identity

Helomnix Builds

  • Outcome-agnostic disease manifolds
  • Stable functional state definitions
  • Projection-based assignment without retraining
  • Structured, mechanism-aware outputs

From static labels to structured biological states.

Digital Twin Infrastructure vs Ad-Hoc Analytics

Ad-Hoc Analytics
Helomnix Infrastructure
Trial-specific modeling
Universal Reference Map
Static risk labels
Dynamic functional states
Feature-level interpretation
Coherent state biology
Retrain for every dataset
Projection without retraining
Narrative slide decks
Structured, audit-ready reports

Biology-First Digital Twins

Built using unsupervised, outcome-agnostic modeling to capture intrinsic biological programs. Patients are represented as positions within a functional disease landscape rather than isolated feature vectors.

State-Based Patient Representation

Organizing patients into interpretable biological states enables consistent stratification across cohorts, supports comparison between studies, and facilitates mechanistic interpretation beyond single biomarkers.

Audit-Ready, Evidence-Traceable Outputs

The platform delivers state definitions, molecular signatures, pathway context, and evidence-traceable reports — designed to integrate into translational research and early drug development workflows.

What Helomnix Supports

All outputs are designed to support scientific decision-making, not to replace it.

Leakage-aware multi-omics patient stratification into interpretable functional states
Biomarker discovery supported by OmniRef knowledge annotation
Target context analysis across disease states
Drug opportunity mapping to prioritize hypotheses for follow-up studies
Evidence-traceable translational reporting for early development programs

How the Platform Works

1

Multi-Omics Integration

Transcriptomic, genomic, and microenvironmental data are integrated at the cohort level.

2

Digital Twin Map

Unsupervised latent programs define a stable reference map of functional disease states.

3

Cohort Projection

New samples or cohorts are projected onto the reference map without retraining or outcome leakage.

4

Translational Readouts

State assignments, molecular signatures, and mechanistic annotations delivered through structured reports.

See a Digital Twin Report Example

Preview how structured state modeling translates into actionable translational insight.

Cohort-level state topology and functional state definitions
Mechanism-aware biomarker context
Compound-state alignment analysis
Audit-ready translational reporting

Scientific Foundation

Helomnix is built at the interface of computational biology, clinical hematology, and translational research, with a strong emphasis on interpretability by design, reproducibility, leakage-aware modeling strategies, and evidence traceability.

Interpretability by Design

Reproducible Methods

Leakage-Aware Modeling

Evidence Traceability

Explore the scientific foundation

Collaborative Partnerships

Helomnix collaborates with academic, clinical, and pharmaceutical partners. Each collaboration is structured to align scientific objectives, data governance, and translational impact.

Pilot Studies

Defined translational questions with structured, reportable outputs.

Co-Development

Joint state model development aligned with program strategy and shared scientific objectives.

Programmatic Collaborations

Reusable disease intelligence embedded across programs and disease areas.

Learn about partnership models

Helomnix provides a structured, biologically grounded approach to understanding disease heterogeneity in hematological cancers. By combining multi-omics integration with reusable, interpretable digital twins, we deliver translational infrastructure — not consulting — for precision medicine programs that demand rigor, transparency, and scientific depth.

Explore a Scientific Engagement

Interested in discussing a translational application or analytical engagement? We welcome inquiries from pharmaceutical companies, research institutions, and clinical teams.

Initiate a Scientific Discussion